[Hpc-forum] sbatch MOPAC2012.exe probléma

HORVATH, Istvan horvathi at gmx.de
2014. Ápr. 3., Cs, 20:57:03 CEST


Kedves sorstársak!

A korábban jól működő, azaz egy .sh-ban sbatch-csel 24 
mopac2012-számolást indító módszer az utóbbi időben nem mindig működik, 
a levél végén mellékelt hibaüzenetet ad.

Azt tapasztaltam, hogy ha pár percen belül több ilyen 24-est indítok, az 
első elindul, a többi pedig nem. Ezzel korábban nem volt gond. 
Mellékelek egy scriptet is. Ha várok pár órát/napot, tovább tudom lökni 
és végre elindul a következő 24-es is.

Köszönöm segítségeteket!

Horváth István

srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied (retrying ...)
srun: error: Munge encode failed: Failed to connect to 
"/var/run/munge/munge.socket.2": Permission denied
srun: error: authentication: Socket communication error
srun: error: Unable to confirm allocation for job 31732: Protocol 
authentication error
srun: Check SLURM_JOB_ID environment variable for expired or invalid job.

--------- következő rész ---------
A non-text attachment was scrubbed...
Name: mozyme10.sh
Type: application/x-sh
Size: 2936 bytes
Desc: nem elérhető
URL: <https://listserv.niif.hu/pipermail/hpc-forum/attachments/20140403/9d5ff131/attachment.sh>


További információk a(z) Hpc-forum levelezőlistáról